> For the complete documentation index, see [llms.txt](https://docs.ccv.brown.edu/bnc-user-manual/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://docs.ccv.brown.edu/bnc-user-manual/xnat-to-bids-intro/xnat2bids-software.md).

# XNAT2BIDS Software

After gathering the requirements described in the [Getting Started Section](/bnc-user-manual/xnat-to-bids-intro/getting-started.md#requirements), you are ready to export your data. We maintain a python package [xnat-tools](https://github.com/brown-bnc/xnat-tools) that facilitates exporting and converting your data to BIDS. The optimal way to install and run the code depends on your computation environment. [The xnat-tools package documentation](https://brown-bnc.github.io/xnat-tools/) explains different installation and execution methods for a general user. Many of our researchers have access to Brown's supercomputer [Oscar](https://docs.ccv.brown.edu/oscar). Here, we will guide you through an example of how to export your data to BIDS within Oscar's computational environment.


---

# Agent Instructions
This documentation is published with GitBook. GitBook is the documentation platform designed so that both humans and AI agents can read, navigate, and reason over technical content effectively. Learn more at gitbook.com.

## Querying This Documentation
If you need additional information that is not directly available in this page, you can query the documentation dynamically by asking a question.

Perform an HTTP GET request on the current page URL with the `ask` query parameter:

```
GET https://docs.ccv.brown.edu/bnc-user-manual/xnat-to-bids-intro/xnat2bids-software.md?ask=<question>
```

The question should be specific, self-contained, and written in natural language.
The response will contain a direct answer to the question and relevant excerpts and sources from the documentation.

Use this mechanism when the answer is not explicitly present in the current page, you need clarification or additional context, or you want to retrieve related documentation sections.