> For the complete documentation index, see [llms.txt](https://docs.ccv.brown.edu/stronghold/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://docs.ccv.brown.edu/stronghold/software.md).

# Software

- [Windows Standard Software](https://docs.ccv.brown.edu/stronghold/software/windows-standard-software.md): Windows workstations come preinstalled with our standard software package. Additional software can be downloaded upon request
- [Linux Standard Software](https://docs.ccv.brown.edu/stronghold/software/linux-standard-software.md)
- [Julia](https://docs.ccv.brown.edu/stronghold/software/linux-standard-software/julia.md)
- [RStudio](https://docs.ccv.brown.edu/stronghold/software/linux-standard-software/rstudio.md)
- [Package Archive Mirrors](https://docs.ccv.brown.edu/stronghold/software/mirrors.md): The Stronghold Team maintains mirrors of the popular Python and R package repositories (i.e., PyPI, CRAN). Thus, users are able to complete their own Python and R package installations.
- [BioConductor Mirror](https://docs.ccv.brown.edu/stronghold/software/mirrors/bioconductor-mirror.md): The following guide will allow users to download R packages from BioConductor by connecting to a trusted mirror from a Linux workstation
- [CRAN Mirror](https://docs.ccv.brown.edu/stronghold/software/mirrors/cran-mirror.md): The following guide will allow users to download R packages from CRAN by connecting to a trusted mirror from either a Linux or Windows workstation
- [PyPI Mirror](https://docs.ccv.brown.edu/stronghold/software/mirrors/pypi-mirror.md)
- [Install R/Python Packages from Local File](https://docs.ccv.brown.edu/stronghold/software/install-r-python-packages-from-local-file.md)
- [Jupyter Lab on Linux Workstations](https://docs.ccv.brown.edu/stronghold/software/jupyter-lab-on-linux-workstations.md)
- [Changing the temporary folder for softwares](https://docs.ccv.brown.edu/stronghold/software/changing-the-temporary-folder-for-softwares.md)
- [SAS](https://docs.ccv.brown.edu/stronghold/software/changing-the-temporary-folder-for-softwares/sas.md)
- [STATA](https://docs.ccv.brown.edu/stronghold/software/changing-the-temporary-folder-for-softwares/stata.md)
- [RStudio](https://docs.ccv.brown.edu/stronghold/software/changing-the-temporary-folder-for-softwares/rstudio.md)
- [Changing Default Package install locations on Windows](https://docs.ccv.brown.edu/stronghold/software/changing-default-package-install-locations-on-windows.md)
- [Python (Pypi packages)](https://docs.ccv.brown.edu/stronghold/software/changing-default-package-install-locations-on-windows/python-pypi-packages.md)
- [R (CRAN Packages)](https://docs.ccv.brown.edu/stronghold/software/changing-default-package-install-locations-on-windows/r-cran-packages.md)
- [Stata packages](https://docs.ccv.brown.edu/stronghold/software/changing-default-package-install-locations-on-windows/stata-packages.md)