> For the complete documentation index, see [llms.txt](https://docs.ccv.brown.edu/bnc-user-manual/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://docs.ccv.brown.edu/bnc-user-manual/xnat.md).

# XNAT

- [Getting Started](https://docs.ccv.brown.edu/bnc-user-manual/xnat/getting-started.md): Getting Started with XNAT
- [Accessing XNAT](https://docs.ccv.brown.edu/bnc-user-manual/xnat/accessing-xnat.md)
- [BIDS Ready Protocols](https://docs.ccv.brown.edu/bnc-user-manual/xnat/bids-compliant-protocols.md): How to name your protocols so they are easily converted to BIDS format
- [New XNAT projects](https://docs.ccv.brown.edu/bnc-user-manual/xnat/project-creation-in-xnat.md)
- [Uploading Data](https://docs.ccv.brown.edu/bnc-user-manual/xnat/uploading-data.md)
- [Uploading raw spectroscopy data](https://docs.ccv.brown.edu/bnc-user-manual/xnat/uploading-data/uploading-raw-spectroscopy-data.md): How to use our custom webapp to upload your MRS data to XNAT
- [Downloading Data](https://docs.ccv.brown.edu/bnc-user-manual/xnat/downloading-data.md): Details of the different options available to download your data from XNAT
- [Project Level De-Identification on XNAT](https://docs.ccv.brown.edu/bnc-user-manual/xnat/project-level-de-identification-on-xnat.md): XNAT allows users to attach de-identification scripts to projects using the software library DicomEdit. The script is applied to data as it is stored on XNAT, and is used to change/remove DICOM tags.